- by Jimmy Fisher
- Oct 19, 2024
In practice, this model equation allows calculation of the probability of a binary outcome based on the combined weighted influence of each included independent variable holding all other predictors constant.
This example demonstrates how scikit-learn can simplify the creation and evaluation of a logistic regression model, delivering quick insights into dataset outcomes.
This code is the rough equivalent to the Python code above. One useful thing to know is that Large Language Models (LLMs) such as ChatGPT can help you code and even explain code to you that you find online. So, for example, with this R script, copy-pasting it into OpenAI's 4o model and asking for an explanation yields the following:
This code implements a logistic regression model in R to predict whether a person has diabetes based on age, BMI, and blood pressure. Here’s a step-by-step explanation:
Load Libraries:
readr
: Used for reading CSV files.caret
: Provides functions for splitting data into training and testing sets, as well as calculating model accuracy.dplyr
: Used for data manipulation (though it’s not actively used in this code).Load the Dataset:
diabetes.csv
using read_csv
and assigned to the variable data
.Define Features and Target:
Age
, BMI
, and BloodPressure
.y
), which represents whether a person has diabetes, is extracted from the column Diabetes
.Combine Features and Target:
cbind
combines the feature matrix X
and target variable y
into a single data frame called dataset
for easier handling in the caret
functions.Train-Test Split:
createDataPartition
splits dataset
into training (70%) and testing (30%) sets.set.seed(42)
ensures reproducibility so that the same data split is achieved every time the code runs.Train the Logistic Regression Model:
glm
trains a logistic regression model using Age
, BMI
, and BloodPressure
as predictors for Diabetes
. The family = binomial
parameter specifies logistic regression.Prediction and Evaluation:
predict
generates predictions on the test data (test_data
). Setting type = "response"
returns probabilities.ifelse
converts these probabilities into binary predictions (1 for diabetes, 0 for no diabetes), based on a threshold of 0.5.accuracy
of the model is calculated by comparing predictions (y_pred_class
) with actual outcomes in the test set.cat
displays the model’s accuracy as a percentage.In summary, the code reads a dataset, splits it, trains a logistic regression model on a subset of the data, makes predictions, and evaluates the model’s accuracy.
Logistic regression is extraordinarily useful for binary classification, where the outcome variable has two possible values (e.g., yes/no, 0/1). It is valued for its simplicity and interpretability, as it provides coefficients that describe the contribution of each predictor variable to the log odds of the outcome. Data scientists can leverage this method to create predictive models that quantify how each variable influences the probability of a specific outcome. Logistic regression builds on concepts from linear regression but is adapted for classification by modeling the log odds of an outcome’s probability rather than the outcome itself.